BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B06SP1|AL428670
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 888 0.0
3x_Contig1722 505 e-143
3x_Contig1384 394 e-109
3x_Contig991 363 e-100
3x_Contig1530 351 2e-96
3x_Contig1717 161 3e-39
3x_Contig869 153 7e-37
3x_Contig278 137 4e-32
3x_Contig1651 129 1e-29
>3x_Contig1461
Length = 5478
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 477 tctacatataactcctctaagaacaataagaaagagatgaaacaacccagatagccatct 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 tctacatataactcctctaagaacaataagaaagagatgaaacaacccagatagccatct 4159
Query: 537 tgttgccacttaatatagctgcattccaacagaccacgccggttctcaaacccgacgtac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 tgttgccacttaatatagctgcattccaacagaccacgccggttctcaaacccgacgtac 4219
Query: 597 attcttgctcagtagtggccgcaattcacttctttttctctgatcctttctcaagatatt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4220 attcttgctcagtagtggccgcaattcacttctttttctctgatcctttctcaagatatt 4279
Query: 657 agatttgactgcggtcatcgtagaatagcgcaacaccacaggaaaatcgaggccttgtgt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 agatttgactgcggtcatcgtagaatagcgcaacaccacaggaaaatcgaggccttgtgt 4339
Query: 717 atgtgttttctcttacttttaagtatgtatttaattgccttctctcaactcgattaagct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 atgtgttttctcttacttttaagtatgtatttaattgccttctctcaactcgattaagct 4399
Query: 777 cgaactaaactgtcaattttatacattataatcatccgtgtaaattaagaaaatgggaaa 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 cgaactaaactgtcaattttatacattataatcatccgtgtaaattaagaaaatgggaaa 4459
Query: 837 aatcgtttttaaaaaaatacttgtaccaaatccaaaagtattttagcagaggaatacaat 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 aatcgtttttaaaaaaatacttgtaccaaatccaaaagtattttagcagaggaatacaat 4519
Query: 897 aaaacaaaaaatgagctaaaatgaattg 924
||||||||||||||||||||||||||||
Sbjct: 4520 aaaacaaaaaatgagctaaaatgaattg 4547
>3x_Contig1722
Length = 17718
Score = 505 bits (255), Expect = e-143
Identities = 304/317 (95%), Gaps = 5/317 (1%)
Strand = Plus / Minus
Query: 1 gatcatagacggccacgtgatggtcttgagtgcgcgtggaggacagtagctgcacaggac 60
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2050 gatcatagacggtcacgtgatggtcttgagtgcgcgtggaggacggtagctgcacaaaac 1991
Query: 61 ctacaagggcatggaggcaatgagttgccatgacgaagt-tgacgaccatgcgagtatat 119
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 1990 ctacaagggcatggaggcaatgagttgccatgacgaagtctgacgaccatccgagtatat 1931
Query: 120 aagtcgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1930 aagtcgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaag 1871
Query: 180 agaaagaagaagcaaggacgcatatactcaacgatctagctaaatagattattatattat 239
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1870 agaaagaag-agcaaggacgcatatactcaacgatctagctaaatag---attatattat 1815
Query: 240 aatcgttgtattgtttgatatcaacgatccctcatcaggcgattaatcaatcaactatca 299
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 attcgttatattgtttgatatcaacgatccctcatcaggcgattaatcaatcaactatca 1755
Query: 300 tccaaagcatatcacaa 316
|||||| ||||||||||
Sbjct: 1754 tccaaaccatatcacaa 1738
>3x_Contig1384
Length = 9372
Score = 394 bits (199), Expect = e-109
Identities = 241/253 (95%), Gaps = 4/253 (1%)
Strand = Plus / Plus
Query: 64 caagggcatggaggcaatgagttgccatgacgaagttgacgaccatgcgagtatataagt 123
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 1 caagggcatggaggcaatgagttgccatgacgaatctgacgaccatccgagtatataagt 60
Query: 124 cgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaagagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaagagaa 120
Query: 184 agaagaagcaaggacgcatatactcaacgatctagctaaatagattattatattataatc 243
|| || ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||
Sbjct: 121 agcag-agcaaggacgcatatactcaacgatctagctaaatag---attttattatattc 176
Query: 244 gttgtattgtttgatatcaacgatccctcatcaggcgattaatcaatcaactatcatcca 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gttatattgtttgatatcaacgatccctcatcaggcgattaatcaatcaactatcatcca 236
Query: 304 aagcatatcacaa 316
|| ||||||||||
Sbjct: 237 aaccatatcacaa 249
>3x_Contig991
Length = 2941
Score = 363 bits (183), Expect = e-100
Identities = 209/215 (97%), Gaps = 2/215 (0%)
Strand = Plus / Plus
Query: 711 ttgtgtatgtgttttctcttacttttaagtatgtatttaattgccttctctcaactcgat 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgtgtatgtgttttctcttacttttaagtatgtatttaattgccttctctcaactcgat 311
Query: 771 taagctcgaactaaactgtcaattttatacattataatcatccgtgtaaattaagaaaat 830
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 312 taagctcgaactaaactgtcaattttatacagtataatcatccgtgtaaattaataaaat 371
Query: 831 gggaaaaatcgttttt-aaaaaaatacttgtaccaaatccaaaagtattttagcagagga 889
| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 372 gtgaaaaagcgtttttaaaaaaaatactt-taccaaatccaaaagtattttagcagagga 430
Query: 890 atacaataaaacaaaaaatgagctaaaatgaattg 924
|||||||||||||||||||||||||||||||||||
Sbjct: 431 atacaataaaacaaaaaatgagctaaaatgaattg 465
>3x_Contig1530
Length = 6216
Score = 351 bits (177), Expect = 2e-96
Identities = 324/373 (86%)
Strand = Plus / Minus
Query: 552 tagctgcattccaacagaccacgccggttctcaaacccgacgtacattcttgctcagtag 611
|||||| ||||||| ||||| |||||||| |||||||| ||| |||||||||||||||||
Sbjct: 6216 tagctggattccaaaagaccccgccggttttcaaaccccacgaacattcttgctcagtag 6157
Query: 612 tggccgcaattcacttctttttctctgatcctttctcaagatattagatttgactgcggt 671
|||| |||||||| |||||||| |||| || ||||||| ||||||||||| ||||||||
Sbjct: 6156 gggccccaattcacctctttttccctgaacccttctcaaaatattagattttactgcggt 6097
Query: 672 catcgtagaatagcgcaacaccacaggaaaatcgaggccttgtgtatgtgttttctctta 731
|||||||||||||||||||||| |||||||| ||||||||| | | | | ||||| | |
Sbjct: 6096 catcgtagaatagcgcaacaccccaggaaaaacgaggcctttttttttttttttcccctc 6037
Query: 732 cttttaagtatgtatttaattgccttctctcaactcgattaagctcgaactaaactgtca 791
| |||||||| ||||||||| || | | |||| ||||||||| ||||| |||||| ||
Sbjct: 6036 cccttaagtatttatttaattccccccccccaacccgattaagcccgaacaaaactggca 5977
Query: 792 attttatacattataatcatccgtgtaaattaagaaaatgggaaaaatcgtttttaaaaa 851
|| || | |||| |||||||||| | ||||||||||||||| ||||||| ||| ||
Sbjct: 5976 atgtttttcattttaatcatccgggggaattaagaaaatggggaaaatcgggtttgggaa 5917
Query: 852 aatacttgtaccaaatccaaaagtattttagcagaggaatacaataaaacaaaaaatgag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5916 aatacttgtaccaaatccaaaagtattttagcagaggaatacaataaaacaaaaaatgag 5857
Query: 912 ctaaaatgaattg 924
|||||||||||||
Sbjct: 5856 ctaaaatgaattg 5844
>3x_Contig1717
Length = 18389
Score = 161 bits (81), Expect = 3e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 331 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 1754
Query: 391 ccgggtacgacctactttttt 411
|||||||||||||||||||||
Sbjct: 1755 ccgggtacgacctactttttt 1775
>3x_Contig869
Length = 2873
Score = 153 bits (77), Expect = 7e-37
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 332 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 1017
Query: 392 cgggtacgacctacttttttt 412
|||||||||||||| ||||||
Sbjct: 1016 cgggtacgacctacctttttt 996
>3x_Contig278
Length = 1114
Score = 137 bits (69), Expect = 4e-32
Identities = 78/81 (96%)
Strand = Plus / Minus
Query: 331 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 390
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 tggttgtataatgtaaaggttatcactttcggttttgatccgaacaaccccggttcgaat 1006
Query: 391 ccgggtacgacctactttttt 411
|||||||||||||||||||||
Sbjct: 1005 ccgggtacgacctactttttt 985
>3x_Contig1651
Length = 13087
Score = 129 bits (65), Expect = 1e-29
Identities = 78/81 (96%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 332 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 391
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13036 ggttctatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 12977
Query: 392 cgggtacgacctacttttttt 412
|||||| ||||| ||||||||
Sbjct: 12976 cgggtaggacct-cttttttt 12957
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7621
Number of Sequences: 1807
Number of extensions: 7621
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 9
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)